StatusResultsProject nameInput dataClosure method Last status changedJob submittedKey
finished Done. whole_cell_traj input.pdb.bz2 Out of the center of mass 2018-02-13 13:35:08 2017-12-31 10:57:17 511f0e4828331bd
Done.

Linking of chromosomes

Legend:

Knot types (Diagonal)
Unknot 31 #31 41 #41 51 #51 52 #52 61 #61 Other knot that we recognize its type Other

Link types (Off-diagonal)
01 ∪ 01 Sum of two unlinked knots Consisting Solomon link Consisting Hopf link Other link that we recognize its type Other (2) Too Complicated


whole Gaussian Linking Number


max |Gaussian Linking Number|

Knots

Chromosome Knot type Probability
view details c -3_1 -3_1 100%
view details d Other Other 100%
view details e 4_1 4_1 100%
view details f 4_1#4_1 4_1#4_1 100%
view details g Other Other 100%
view details h 4_1#-5_1 4_1#-5_1 100%
view details i -3_1#-3_1 -3_1#-3_1 100%
view details k +5_1 +5_1 100%
view details l Other Other 100%
view details m -3_1 -3_1 100%
view details o 6_3 6_3 100%
view details q +3_1#-3_1 +3_1#-3_1 100%
view details r -3_1 -3_1 100%
view details s +3_1 +3_1 100%
view details t Other Other 100%

Links

Chromosome 1 Chromosome 2 Link type Probability whGLN max |GLN| max short |GLN|
view details ab Ring U Ring Ring U Ring 100% -0.009 -0.09 -0.078
view details ac -3_1 U Ring -3_1 U Ring 100% 0.003 0.179 0.146
view details ad Other U Ring Other U Ring 100% 0.001 -0.116 -0.094
view details ae 4_1 U Ring 4_1 U Ring 100% -0.0 -0.079 -0.079
view details af 4_1#4_1 U Ring 4_1#4_1 U Ring 100% 0.012 -0.094 -0.094
view details ag Other_2 Other_2 100% 0.035 0.8 0.705
view details ah 4_1#-5_1 U Ring 4_1#-5_1 U Ring 100% -0.009 0.162 0.146
view details ai -3_1 U -3_1 -3_1 U -3_1 100% 0.042 -1.383 -1.124
view details aj Hopf.2 Hopf.2 100% 0.947 1.356 1.099
view details ak +5_1 U Ring +5_1 U Ring 100% 0.019 0.946 0.946
view details al Other_2 Other_2 100% 0.094 -1.823 -1.823
view details am -3_1 U Ring -3_1 U Ring 100% 0.011 -0.31 -0.31
view details an Ring U Ring Ring U Ring 100% -0.026 0.123 0.123
view details ao 6_3 U Ring 6_3 U Ring 100% -0.002 0.191 0.191
view details ap Ring U Ring Ring U Ring 100% 0.024 -0.236 -0.236
view details aq +3_1#-3_1 U Ring +3_1#-3_1 U Ring 100% 0.003 0.124 0.124
view details ar -3_1 U Ring -3_1 U Ring 100% -0.01 -0.183 -0.154
view details as +3_1 U Ring +3_1 U Ring 100% 0.03 0.589 0.589
view details at Other_2 Other_2 100% -0.043 0.554 0.554
view details bc -3_1 U Ring -3_1 U Ring 100% 0.052 0.394 0.394
view details bd Other U Ring Other U Ring 100% -0.095 -0.263 -0.263
view details be 4-1 U Ring 4-1 U Ring 100% 0.018 -0.687 -0.593
view details bf Other_2 Other_2 100% -0.402 -1.632 -1.386
view details bg Other U Ring Other U Ring 100% 0.034 -0.338 -0.288
view details bh 4_1#-5_1 U Ring 4_1#-5_1 U Ring 100% 0.019 0.057 0.057
view details bi -3_1#-3_1 U Ring -3_1#-3_1 U Ring 100% -0.037 -0.062 -0.062
view details bj Ring U Ring Ring U Ring 100% -0.003 -0.075 -0.075
view details bk +5_1 U Ring +5_1 U Ring 100% -0.031 -0.063 -0.054
view details bl Other U Ring Other U Ring 100% -0.005 -0.054 -0.054
view details bm -3_1 U Ring -3_1 U Ring 100% -0.034 -0.061 -0.061
view details bo Other_2 Other_2 100% 0.057 0.727 0.59
view details bp Ring U Ring Ring U Ring 100% -0.031 -0.057 -0.057
view details bq +3_1#-3_1 U Ring +3_1#-3_1 U Ring 100% 0.009 0.096 0.096
view details br -3_1 U Ring -3_1 U Ring 100% -0.061 -0.094 -0.094
view details bs +3_1 U Ring +3_1 U Ring 100% -0.016 -0.036 -0.03
view details bt Other_2 Other_2 100% -0.09 -0.849 -0.849
view details cd -3_1 U Other -3_1 U Other 100% -0.001 0.131 0.116
view details ce -3_1 U 4_1 -3_1 U 4_1 100% 0.094 0.845 0.771
view details cf -3_1 U 4_1#4_1 -3_1 U 4_1#4_1 100% 0.021 -0.237 -0.237
view details cg -3_1 U Other -3_1 U Other 100% -0.007 0.113 0.113
view details ch -3_1 U 4_1#-5_1 -3_1 U 4_1#-5_1 100% -0.003 0.063 0.063
view details ci -3_1 U -3_1#-3_1 -3_1 U -3_1#-3_1 100% -0.054 -0.301 -0.254
view details cj -3_1 U Ring -3_1 U Ring 100% -0.028 0.375 0.375
view details ck -3_1 U +5_1 -3_1 U +5_1 100% -0.016 -0.058 -0.058
view details cl -3_1 U Other -3_1 U Other 100% -0.005 -0.08 -0.08
view details cm -3_1 U -3_1 -3_1 U -3_1 100% -0.042 -0.157 -0.157
view details cn -3_1 U Ring -3_1 U Ring 100% 0.211 1.0 0.895
view details co -3_1 U 6_3 -3_1 U 6_3 100% 0.01 -0.28 -0.23
view details cp -3_1 U Ring -3_1 U Ring 100% -0.082 -0.795 -0.674
view details cq Other_2 Other_2 100% 1.069 1.675 1.363
view details cr -3_1 U -3_1 -3_1 U -3_1 100% 0.587 2.147 2.147
view details cs +3_1 U -3_1 +3_1 U -3_1 100% -0.012 -0.057 -0.057
view details ct Other_2 Other_2 100% -0.039 -0.484 -0.418
view details de 4_1 U Other 4_1 U Other 100% 0.023 -0.095 -0.095
view details df Other_2 Other_2 100% -0.083 1.186 1.186
view details dg Other_2 Other_2 100% 0.077 0.509 0.42
view details dh Other_2 Other_2 100% -0.346 -0.708 -0.708
view details di -3_1#-3_1 U Other -3_1#-3_1 U Other 100% -0.008 -0.109 -0.109
view details dj Other U Ring Other U Ring 100% 0.01 0.063 0.063
view details dk +5_1 U Other +5_1 U Other 100% -0.012 0.101 0.101
view details dl Other U Other Other U Other 100% 0.008 0.089 0.089
view details dm -3_1 U Other -3_1 U Other 100% -0.028 0.052 0.052
view details dn Other U Ring Other U Ring 100% 0.012 -0.077 -0.077
view details do Other_2 Other_2 100% 0.358 1.243 1.112
view details dp Other U Ring Other U Ring 100% -0.006 0.068 0.068
view details dq Other_2 Other_2 100% 0.324 0.64 0.64
view details dr -3_1 U Other -3_1 U Other 100% -0.004 0.042 0.042
view details ds +3_1 U Other +3_1 U Other 100% 0.024 0.081 0.081
view details dt Other U Other Other U Other 100% 0.082 0.374 0.336
view details ef Other_2 Other_2 100% 0.119 0.56 0.505
view details eg 4_1 U Other 4_1 U Other 100% 0.051 0.09 0.09
view details eh 4_1 U 4_1#-5_1 4_1 U 4_1#-5_1 100% 0.042 0.05 0.05
view details ei 4_1 U -3_1#-3_1 4_1 U -3_1#-3_1 100% -0.004 -0.054 -0.054
view details ej 4_1 U Ring 4_1 U Ring 100% 0.022 0.169 0.169
view details ek 4_1 U +5_1 4_1 U +5_1 100% 0.002 -0.031 -0.031
view details el 4_1 U Other 4_1 U Other 100% 0.009 0.048 0.048
view details em -3_1 U 4_1 -3_1 U 4_1 100% -0.026 -0.066 -0.066
view details en 4_1 # Hopf.1 4_1 # Hopf.1 100% 1.294 2.177 2.006
view details eo 4_1 U 6_3 4_1 U 6_3 100% 0.044 0.119 0.099
view details ep 4_1 U Ring 4_1 U Ring 100% -0.03 -0.085 -0.085
view details eq 4_1 U +3_1#-3_1 4_1 U +3_1#-3_1 100% 0.026 -0.371 -0.322
view details er -3_1 U 4_1 -3_1 U 4_1 100% -0.075 -0.246 -0.246
view details es +3_1 U 4_1 +3_1 U 4_1 100% -0.008 -0.04 -0.04
view details et 4_1 U Other 4_1 U Other 100% 0.098 0.286 0.286
view details fg Other_2 Other_2 100% -0.112 0.627 0.573
view details fh 4_1#-5_1 U 4_1#4_1 4_1#-5_1 U 4_1#4_1 100% -0.097 -0.188 -0.156
view details fi -3_1#-3_1 U 4_1#4_1 -3_1#-3_1 U 4_1#4_1 100% -0.045 -0.082 -0.082
view details fj 4_1#4_1 U Ring 4_1#4_1 U Ring 100% -0.025 -0.067 -0.067
view details fk +5_1 U 4_1#4_1 +5_1 U 4_1#4_1 100% -0.069 -0.097 -0.087
view details fl 4_1#4_1 U Other 4_1#4_1 U Other 100% -0.007 -0.084 -0.084
view details fm -3_1 U 4_1#4_1 -3_1 U 4_1#4_1 100% -0.057 -0.08 -0.08
view details fn Other_2 Other_2 100% -0.045 0.468 0.389
view details fo Other_2 Other_2 100% 0.231 0.738 0.652
view details fp 4_1#4_1 U Ring 4_1#4_1 U Ring 100% -0.054 -0.073 -0.073
view details fq Other_2 Other_2 100% 0.034 0.503 0.503
view details fr -3_1 U 4_1#4_1 -3_1 U 4_1#4_1 100% -0.081 -0.101 -0.101
view details fs +3_1 U 4_1#4_1 +3_1 U 4_1#4_1 100% -0.021 -0.05 -0.042
view details ft 4_1#4_1 U Other 4_1#4_1 U Other 100% -0.2 -0.317 -0.317
view details gh Other_2 Other_2 100% 0.133 0.426 0.353
view details gi -3_1#-3_1 U Other -3_1#-3_1 U Other 100% 0.042 -0.196 -0.169
view details gj Other_2 Other_2 100% 0.301 0.583 0.583
view details gk Other_2 Other_2 100% 0.004 -1.045 -0.874
view details gl Other U Other Other U Other 100% 0.075 0.398 0.329
view details gm -3_1 U Other -3_1 U Other 100% 0.017 0.082 0.082
view details gn Other U Ring Other U Ring 100% 0.077 0.134 0.134
view details go Other_2 Other_2 100% -0.198 -0.579 -0.476
view details gp Other U Ring Other U Ring 100% 0.047 0.076 0.076
view details gq +3_1#-3_1 U Other +3_1#-3_1 U Other 100% -0.058 -0.113 -0.097
view details gr -3_1 U Other -3_1 U Other 100% 0.057 0.12 0.12
view details gs +3_1 U Other +3_1 U Other 100% 0.005 -0.146 -0.134
view details gt Other_2 Other_2 100% 0.895 1.85 1.582
view details hi -3_1#-3_1 U 4_1#-5_1 -3_1#-3_1 U 4_1#-5_1 100% 0.011 -0.121 -0.121
view details hj 4_1#-5_1 U Ring 4_1#-5_1 U Ring 100% 0.029 0.063 0.063
view details hk Other_2 Other_2 100% -0.048 0.58 0.526
view details hl Other_2 Other_2 100% 0.001 -0.491 -0.491
view details hm -3_1 U 4_1#-5_1 -3_1 U 4_1#-5_1 100% 0.008 -0.087 -0.087
view details hn 4_1#-5_1 U Ring 4_1#-5_1 U Ring 100% 0.046 0.059 0.059
view details ho Other_2 Other_2 100% -0.478 -0.896 -0.896
view details hp 4_1#-5_1 U Ring 4_1#-5_1 U Ring 100% 0.045 0.072 0.072
view details hq +3_1#-3_1 U 4_1#-5_1 +3_1#-3_1 U 4_1#-5_1 100% -0.071 -0.336 -0.336
view details hr -3_1 U 4_1#-5_1 -3_1 U 4_1#-5_1 100% 0.026 0.047 0.047
view details hs +3_1 U 4_1#-5_1 +3_1 U 4_1#-5_1 100% 0.039 0.167 0.167
view details ht Other_2 Other_2 100% 0.194 -0.425 -0.367
view details ij -3_1 # -3_1 # Hopf.2 -3_1 # -3_1 # Hopf.2 100% -0.058 0.565 0.565
view details ik +5_1 U -3_1#-3_1 +5_1 U -3_1#-3_1 100% 0.016 0.104 0.104
view details il Other_2 Other_2 100% 0.031 0.502 0.427
view details im Other_2 Other_2 100% -1.187 -2.167 -2.167
view details in -3_1#-3_1 U Ring -3_1#-3_1 U Ring 100% 0.005 0.153 0.153
view details io 6_3 U -3_1#-3_1 6_3 U -3_1#-3_1 100% -0.05 -0.072 -0.072
view details ip -3_1#-3_1 U Ring -3_1#-3_1 U Ring 100% -0.018 0.586 0.586
view details iq +3_1#-3_1 U -3_1#-3_1 +3_1#-3_1 U -3_1#-3_1 100% -0.058 -0.196 -0.196
view details ir -3_1 U -3_1#-3_1 -3_1 U -3_1#-3_1 100% 0.054 0.301 0.301
view details is Other_2 Other_2 100% 0.038 1.189 1.189
view details it Other_2 Other_2 100% -0.177 -0.686 -0.599
view details jk +5_1 U Ring +5_1 U Ring 100% 0.005 0.085 0.069
view details jl Other U Ring Other U Ring 100% 0.024 -0.209 -0.169
view details jm -3_1 U Ring -3_1 U Ring 100% -0.125 0.617 0.562
view details jo 6_3 U Ring 6_3 U Ring 100% -0.005 -0.168 -0.168
view details jp Ring U Ring Ring U Ring 100% -0.021 0.312 0.312
view details jq +3_1#-3_1 U Ring +3_1#-3_1 U Ring 100% 0.001 0.088 0.088
view details jr -3_1 U Ring -3_1 U Ring 100% 0.145 1.049 1.049
view details js +3_1 U Ring +3_1 U Ring 100% -0.022 -0.097 -0.097
view details jt Other_2 Other_2 100% 0.152 1.056 1.056
view details kl Other_2 Other_2 100% -0.144 -0.811 -0.699
view details km -3_1 U +5_1 -3_1 U +5_1 100% -0.011 -0.063 -0.063
view details kn +5_1 U Ring +5_1 U Ring 100% 0.008 -0.04 -0.033
view details ko +5_1 U 6_3 +5_1 U 6_3 100% -0.048 -0.188 -0.188
view details kp +5_1 U Ring +5_1 U Ring 100% 0.004 0.041 0.041
view details kq +5_1 U +3_1#-3_1 +5_1 U +3_1#-3_1 100% -0.009 -0.049 -0.049
view details kr -3_1 U +5_1 -3_1 U +5_1 100% 0.009 0.043 0.043
view details ks +3_1 U +5_1 +3_1 U +5_1 100% 0.022 0.115 0.115
view details kt +5_1 U Other +5_1 U Other 100% 0.004 0.194 0.194
view details lm -3_1 U Other -3_1 U Other 100% 0.008 -0.146 -0.146
view details ln Other U Ring Other U Ring 100% 0.011 0.067 0.059
view details lo 6_3 U Other 6_3 U Other 100% -0.037 -0.105 -0.105
view details lp Other U Ring Other U Ring 100% 0.018 0.056 0.056
view details lq +3_1#-3_1 U Other +3_1#-3_1 U Other 100% -0.011 -0.065 -0.065
view details lr -3_1 U Other -3_1 U Other 100% 0.013 0.056 0.056
view details ls Other_2 Other_2 100% -0.111 0.846 0.846
view details lt Other U Other Other U Other 100% -0.036 -0.224 -0.224
view details mn -3_1 U Ring -3_1 U Ring 100% -0.033 -0.368 -0.334
view details mo -3_1 U 6_3 -3_1 U 6_3 100% -0.047 -0.051 -0.051
view details mp -3_1 # Hopf.1 -3_1 # Hopf.1 100% 0.19 -1.002 -0.842
view details mq -3_1 U +3_1#-3_1 -3_1 U +3_1#-3_1 100% -0.055 -0.148 -0.122
view details mr -3_1 U -3_1 -3_1 U -3_1 100% 0.08 0.291 0.291
view details ms +3_1 U -3_1 +3_1 U -3_1 100% -0.037 0.277 0.277
view details mt Other_2 Other_2 100% -0.1 -0.523 -0.444
view details no 6_3 U Ring 6_3 U Ring 100% 0.023 -0.159 -0.133
view details np Ring U Ring Ring U Ring 100% -0.031 0.274 0.23
view details nq +3_1#-3_1 U Ring +3_1#-3_1 U Ring 100% 0.027 -0.219 -0.219
view details nr -3_1 # Hopf.2 -3_1 # Hopf.2 100% -0.269 -0.627 -0.627
view details ns +3_1 U Ring +3_1 U Ring 100% -0.005 0.056 0.056
view details nt Other_2 Other_2 100% 0.1 0.752 0.716
view details op 6_3 U Ring 6_3 U Ring 100% -0.027 -0.043 -0.043
view details oq Other_2 Other_2 100% -0.16 -0.573 -0.481
view details or -3_1 U 6_3 -3_1 U 6_3 100% -0.023 -0.087 -0.087
view details os +3_1 U 6_3 +3_1 U 6_3 100% -0.009 -0.037 -0.037
view details ot Other_2 Other_2 100% 0.868 1.507 1.289
view details pq +3_1#-3_1 U Ring +3_1#-3_1 U Ring 100% 0.03 0.209 0.209
view details pr -3_1 U Ring -3_1 U Ring 100% 0.024 0.894 0.894
view details ps +3_1 U Ring +3_1 U Ring 100% -0.002 0.118 0.118
view details pt Other U Ring Other U Ring 100% 0.114 0.297 0.261
view details qr -3_1 U +3_1#-3_1 -3_1 U +3_1#-3_1 100% -0.024 -0.115 -0.115
view details qs +3_1 U +3_1#-3_1 +3_1 U +3_1#-3_1 100% 0.001 0.096 0.078
view details qt Other_2 Other_2 100% -0.002 0.611 0.531
view details rs +3_1 U -3_1 +3_1 U -3_1 100% 0.003 0.067 0.067
view details rt -3_1 U Other -3_1 U Other 100% 0.088 0.272 0.272
view details st +3_1 U Other +3_1 U Other 100% -0.031 -0.338 -0.292

Relaxation results

Legend:

Relaxation of single chromosome (Diagonal) / pairs of chromosomes (Off-diagonal)
Structure is Unknotted / Unlinked and relaxation does Not Change it. Structure is Knotted / Linked and relaxation does Not Change it. Structure is Knotted / Linked, and after relaxation it is Unknotted / Unlinked. Relaxation Changes the type of entanglement of structure.
This job will be automatically deleted within 14 days after submission

KnotGenom | Interdisciplinary Laboratory of Biological Systems Modelling